STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC27985.1PFAM: ATPase family associated with various cellular activities (AAA). (330 aa)    
Predicted Functional Partners:
EIC27986.1
PFAM: Protein of unknown function DUF58.
 
  
 0.955
EIC27988.1
Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain.
 
  
  0.948
EIC27989.1
PFAM: von Willebrand factor type A domain; Tetratricopeptide repeat.
 
   
 0.919
EIC27987.1
Hypothetical protein.
 
  
  0.881
EIC27991.1
Hypothetical protein.
 
  
 0.741
EIC27990.1
PFAM: Transposase DDE domain; manually curated.
       0.539
EIC28047.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488).
 
   
 0.522
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.