Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC28521.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
EIC28522.1
PFAM: Protein of unknown function (DUF1469).
       0.788
EIC28523.1
Hypothetical protein.
       0.773
EIC28520.1
Hypothetical protein.
       0.550
EIC28519.1
PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein.
  
    0.543
EIC28517.1
Putative periplasmic or secreted lipoprotein; PFAM: Putative phospholipid-binding domain.
  
    0.493
EIC28518.1
Hypothetical protein.
       0.466
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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