STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC28562.1PFAM: Bacterial regulatory proteins, tetR family. (209 aa)    
Predicted Functional Partners:
EIC28563.1
Hypothetical protein.
 
     0.804
EIC28565.1
PFAM: 56kDa selenium binding protein (SBP56).
       0.674
EIC28564.1
PFAM: Protein of unknown function (DUF1271).
       0.672
EIC28561.1
Protein-tyrosine-phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase.
    
  0.575
EIC28024.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.531
EIC28560.1
Dienelactone hydrolase-like enzyme; PFAM: Dienelactone hydrolase family.
       0.524
EIC29078.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
   
 
 0.505
EIC30720.1
PAS domain S-box; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; MASE1; PAS fold; TIGRFAM: PAS domain S-box.
    
 
 0.440
EIC29973.1
Putative ATPase; PFAM: Protein kinase domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
    
 
 0.416
EIC30019.1
PFAM: Protein of unknown function (DUF1597).
  
     0.411
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.