Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC28663.1Hypothetical protein. (99 aa)    
Predicted Functional Partners:
EIC28662.1
Hypothetical protein.
       0.736
EIC28099.1
Putative NTP binding protein (contains STAS domain); PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
  
     0.732
metAS
Homoserine trans-succinylase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.
       0.717
EIC28660.1
PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region.
       0.712
EIC29161.1
Hypothetical protein.
  
     0.702
EIC30551.1
PFAM: Copper resistance protein D.
  
     0.685
EIC30400.1
Hypothetical protein.
  
     0.659
EIC29611.1
PFAM: Protein of unknown function (DUF2970).
  
     0.658
EIC30819.1
PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance.
  
     0.657
EIC30661.1
Putative enzyme of heme biosynthesis; PFAM: HemX; overlaps another CDS with the same product name.
  
     0.655
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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