Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EIC28787.1PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. (476 aa)    
Predicted Functional Partners:
EIC28791.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
  
  0.745
EIC29025.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; manually curated; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.663
EIC30472.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.657
EIC30473.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family.
 
  0.653
EIC29026.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family.
 
  0.632
EIC28788.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
       0.613
EIC28789.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
       0.613
EIC28790.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
       0.613
EIC28792.1
PFAM: Bacterial regulatory proteins, tetR family.
       0.613
EIC29262.1
PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.606
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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