STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC28857.1PFAM: WD40-like Beta Propeller Repeat. (354 aa)    
Predicted Functional Partners:
EIC29723.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
  
  0.735
EIC29762.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
  
  0.697
cpoB
Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
  
 0.626
EIC28331.1
Hypothetical protein.
   
  0.624
EIC28957.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
   
  0.624
EIC29072.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
   
  0.624
EIC29204.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
   
  0.624
EIC30434.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
   
  0.624
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
  0.624
EIC31618.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
   
  0.624
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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