Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EIC28993.1FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD. (440 aa)    
Predicted Functional Partners:
EIC28991.1
FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 
0.999
EIC28992.1
PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC.
 
 0.999
EIC28995.1
Cysteine desulfurase-like protein, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.981
EIC31292.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.954
EIC28996.1
PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family.
 
  
 0.919
EIC28158.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein, VC1184 subfamily.
 
 
 0.832
EIC30896.1
PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: iron-sulfur cluster assembly protein IscA; Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
  
 
 0.824
EIC29242.1
PFAM: Domain of unknown function DUF59; TIGRFAM: probable FeS assembly SUF system protein SufT.
 
   
 0.819
EIC29936.1
Selenocysteine lyase; PFAM: Aminotransferase class-V.
 
 
 0.793
EIC28990.1
PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; FeS assembly SUF system regulator, gammaproteobacterial.
 
   
 0.646
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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