Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC29048.1Hypothetical protein. (324 aa)    
Predicted Functional Partners:
EIC28180.1
Hypothetical protein; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
   
    0.564
EIC28173.1
Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
   
    0.518
EIC27995.1
PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
    
   0.407
EIC28079.1
Hypothetical protein.
    
   0.407
EIC28281.1
PFAM: Arylsulfotransferase (ASST).
    
   0.407
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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