STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC29134.1Hypothetical protein with double-stranded beta-helix domain; PFAM: Cupin domain. (159 aa)    
Predicted Functional Partners:
EIC29135.1
PFAM: SnoaL-like polyketide cyclase.
      0.702
EIC30666.1
Hypothetical protein.
  
     0.606
EIC29784.1
Putative metal-dependent hydrolase; PFAM: Putative cyclase.
  
    0.600
EIC28157.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2257).
  
     0.483
EIC29136.1
Hypothetical protein.
       0.479
EIC29172.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.