Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC29459.1PFAM: DsrH like protein; TIGRFAM: sulfur relay protein TusB/DsrH. (96 aa)    
Predicted Functional Partners:
EIC31356.1
PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusC/DsrF; Belongs to the DsrF/TusC family.
 
 0.995
EIC29460.1
Sulfur relay protein, TusE/DsrC/DsvC family; Part of a sulfur-relay system.
 
 
 0.985
EIC31355.1
PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusD/DsrE.
 
 
 0.981
EIC29458.1
Cation/cationic drug transporter; PFAM: Small Multidrug Resistance protein.
       0.781
EIC29793.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c.
  
     0.723
EIC31449.1
Hypothetical protein.
  
     0.634
EIC29790.1
Hypothetical protein.
  
     0.614
EIC29792.1
Putative secreted protein.
  
     0.607
EIC29791.1
PFAM: Sulphur oxidation protein SoxZ.
  
     0.583
EIC29457.1
Deacetylase, histone deacetylase/acetoin utilization protein; PFAM: Histone deacetylase domain.
       0.540
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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