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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC29754.1PFAM: Predicted periplasmic lipoprotein (DUF2279). (426 aa)    
Predicted Functional Partners:
EIC29755.1
Exopolyphosphatase; PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase; Belongs to the GppA/Ppx family.
       0.783
EIC28034.1
Hypothetical protein.
  
     0.732
EIC31029.1
PFAM: Outer membrane efflux protein.
  
     0.726
EIC30645.1
PFAM: CAAX amino terminal protease family.
  
     0.719
EIC29660.1
PFAM: GTPase of unknown function.
  
     0.675
EIC29225.1
TIGRFAM: TIGR02099 family protein.
  
     0.642
EIC30819.1
PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance.
  
     0.580
EIC28926.1
TIGRFAM: putative PEP-CTERM/exosortase system-associated acyltransferase.
  
     0.570
EIC28864.1
Hypothetical protein.
  
     0.567
EIC29661.1
PFAM: GTPase of unknown function.
  
     0.554
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.