Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC29768.1Transcriptional regulator; PFAM: MarR family. (188 aa)    
Predicted Functional Partners:
EIC30750.1
PFAM: Protein of unknown function, DUF393.
  
     0.747
EIC29769.1
PFAM: Domain of unknown function (DUF2024).
 
     0.736
EIC29078.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
  
  
 0.686
EIC30059.1
PFAM: Cytochrome c.
     
  0.674
EIC30551.1
PFAM: Copper resistance protein D.
  
     0.669
EIC29660.1
PFAM: GTPase of unknown function.
  
     0.652
EIC29187.1
PFAM: Multicopper oxidase.
  
     0.642
EIC28188.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
     
 0.632
EIC29661.1
PFAM: GTPase of unknown function.
  
     0.628
EIC30720.1
PAS domain S-box; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; MASE1; PAS fold; TIGRFAM: PAS domain S-box.
  
  
 0.624
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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