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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC29768.1Transcriptional regulator; PFAM: MarR family. (188 aa)    
Predicted Functional Partners:
EIC30750.1
PFAM: Protein of unknown function, DUF393.
  
     0.747
EIC29769.1
PFAM: Domain of unknown function (DUF2024).
 
     0.730
EIC30551.1
PFAM: Copper resistance protein D.
  
     0.669
EIC29660.1
PFAM: GTPase of unknown function.
  
     0.652
EIC29187.1
PFAM: Multicopper oxidase.
  
     0.642
EIC29661.1
PFAM: GTPase of unknown function.
  
     0.628
EIC31354.1
PFAM: Multicopper oxidase.
  
     0.566
EIC28118.1
PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
     
 0.564
EIC29973.1
Putative ATPase; PFAM: Protein kinase domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
 
 
 0.555
EIC30454.1
Hypothetical protein; PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase.
    
 0.550
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.