Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC29886.1Hypothetical protein. (1507 aa)    
Predicted Functional Partners:
EIC28198.1
PDK repeat-containing protein; PFAM: Fibronectin type III domain; PKD domain.
 
 0.829
EIC28015.1
Ca2+-binding protein, RTX toxin; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
  
 
  0.816
EIC30171.1
Rhs family protein; PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies).
  
 
  0.778
EIC28704.1
Hypothetical protein.
  
  
  0.764
EIC31610.1
Hypothetical protein.
  
 
  0.764
EIC29050.1
PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
  
 
  0.733
EIC31437.1
PFAM: Putative Ig domain.
  
 
  0.723
EIC29887.1
Hypothetical protein.
 
  
 
0.690
EIC28585.1
DNA segregation ATPase, FtsK/SpoIIIE family; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
    
 
 0.688
EIC29606.1
PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); manually curated.
  
 
  0.688
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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