Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC29887.1Hypothetical protein. (1971 aa)    
Predicted Functional Partners:
EIC28015.1
Ca2+-binding protein, RTX toxin; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
  
  
  0.750
EIC29886.1
Hypothetical protein.
 
  
 
0.690
EIC28704.1
Hypothetical protein.
 
     0.686
EIC30171.1
Rhs family protein; PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies).
  
     0.650
EIC29289.1
Putative calcium-binding protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
  
  
  0.647
EIC29050.1
PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
  
     0.522
EIC29888.1
Microcystin-dependent protein; PFAM: Phage Tail Collar Domain.
 
     0.515
EIC28718.1
SapC; PFAM: SapC.
  
     0.509
EIC29891.1
Putative acyltransferase; PFAM: Acetyltransferase (GNAT) family.
 
     0.507
EIC29889.1
Microcystin-dependent protein; PFAM: Phage Tail Collar Domain.
 
     0.497
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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