Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EIC30011.1Transcriptional regulator; Overlaps another CDS with the same product name. (147 aa)    
Predicted Functional Partners:
EIC30012.1
Transcriptional regulator; Overlaps another CDS with the same product name.
 
0.999
EIC30010.1
Hypothetical protein.
 
 0.998
EIC30008.1
PFAM: Cytochrome D1 heme domain; TIGRFAM: 40-residue YVTN family beta-propeller repeat.
 
  
 0.994
EIC30007.1
Hypothetical protein.
 
    0.983
EIC30013.1
PFAM: Radical SAM superfamily; TIGRFAM: heme d1 biosynthesis radical SAM protein NirJ; radical SAM additional 4Fe4S-binding domain.
 
 0.976
EIC30005.1
Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c; Cytochrome D1 heme domain.
 
    0.971
EIC30009.1
Transcriptional regulator.
 
 
0.964
EIC28630.1
Nitric oxide reductase large subunit; PFAM: Cytochrome c.
 
    0.874
EIC28629.1
Nitric oxide reductase large subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
    0.857
EIC31012.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric.
    
  0.803
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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