Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC30032.1PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr4. (310 aa)    
Predicted Functional Partners:
EIC30031.1
PFAM: CRISPR-associated protein (Cas_Cmr5); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr5.
 
 
 
 0.991
EIC30030.1
PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr6.
 
 
 
 0.990
EIC30034.1
PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B.
 
 
 
 0.981
EIC30033.1
PFAM: CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr3.
 
 
 
 0.972
EIC30035.1
Hypothetical protein.
   
 
 0.906
EIC30026.1
PFAM: Domain of unknown function (DUF1887).
 
     0.902
EIC30036.1
PFAM: CRISPR-associated protein NE0113 (Cas_NE0113); TIGRFAM: CRISPR-associated protein, NE0113 family.
 
     0.885
EIC30037.1
Uncharacterized RAMP superfamily protein probably involved in DNA repair; PFAM: Uncharacterized conserved protein (DUF2276).
 
   
 0.885
EIC30027.1
Adenosine deaminase; PFAM: CRISPR-associated protein NE0113 (Cas_NE0113); Adenosine/AMP deaminase; TIGRFAM: CRISPR-associated protein, NE0113 family; adenosine deaminase.
 
     0.871
EIC30028.1
PFAM: Putative CRISPR-associated protein (Cas_VVA1548); TIGRFAM: putative CRISPR-associated protein, VVA1548 family.
       0.779
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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