STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC30245.1Hypothetical protein. (399 aa)    
Predicted Functional Partners:
EIC30244.1
Hypothetical protein.
 
    0.948
EIC30246.1
PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
   0.928
EIC28003.1
Hypothetical protein.
 
    0.779
EIC28926.1
TIGRFAM: putative PEP-CTERM/exosortase system-associated acyltransferase.
 
     0.769
EIC28005.1
PFAM: GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
  
 
   0.745
EIC31300.1
Hypothetical protein.
  
 
 
 0.740
EIC30443.1
Hypothetical protein.
  
     0.736
EIC28351.1
Hypothetical protein.
  
 
   0.672
EIC29800.1
PFAM: VacJ like lipoprotein.
  
 
   0.626
EIC31438.1
PFAM: VacJ like lipoprotein.
  
 
   0.622
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.