STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC30286.1PFAM: Flavoprotein. (178 aa)    
Predicted Functional Partners:
EIC31171.1
PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; Belongs to the RimK family.
  
  
  0.960
EIC30287.1
PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase-related protein.
 
     0.950
EIC28652.1
PFAM: Protein of unknown function (DUF556).
 
     0.810
EIC28653.1
PFAM: Protein of unknown function (DUF447).
 
     0.808
EIC30518.1
Hypothetical protein.
 
     0.806
EIC31174.1
beta-RFAP synthase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: beta-RFAP synthase; manually curated.
 
    0.803
EIC28259.1
TIGRFAM: formylmethanofuran dehydrogenase subunit B.
 
     0.789
EIC30866.1
Dihydropteroate synthase-like enzyme; TIGRFAM: dihydropteroate synthase-related protein.
 
     0.788
EIC31173.1
Putative ATP-dependent carboligase; PFAM: ATP-grasp domain.
 
     0.786
ffsA
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
     0.784
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.