Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC30459.1Transposase, IS1 family; PFAM: IS1 transposase. (157 aa)    
Predicted Functional Partners:
EIC30460.1
Transposase; PFAM: Insertion element protein.
     0.990
EIC29503.1
Regulator of stationary/sporulation gene expression; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family.
  
     0.669
EIC31398.1
Outer membrane receptor for ferrienterochelin and colicin; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain.
  
     0.596
EIC31400.1
Streptogramin lyase.
  
     0.587
EIC31401.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.498
EIC29502.1
Putative nucleic acid-binding protein; Contains PIN domain; PFAM: PIN domain.
  
     0.481
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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