STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC30529.1Hypothetical protein; PFAM: Cupin domain; contains double-stranded beta-helix domain. (129 aa)    
Predicted Functional Partners:
EIC30530.1
PFAM: GumN protein.
       0.773
EIC28302.1
Chorismate mutase, clade 2; PFAM: Prephenate dehydratase; Chorismate mutase type II; ACT domain; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2.
  
 
 0.572
EIC28747.1
PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
  
    0.569
metG
Beta chain of methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.534
EIC30331.1
Mannose-6-phosphate isomerase; PFAM: Cupin domain; manually curated.
  
  0.527
EIC30477.1
Cupin domain-containing protein; PFAM: Cupin domain.
  
  0.527
EIC29559.1
TIGRFAM: flagellar motor stator protein MotA.
    
   0.524
EIC30855.1
Flagellar motor component; PFAM: MotA/TolQ/ExbB proton channel family.
    
   0.524
EIC29078.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain.
     
 0.521
EIC28573.1
PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 0.517
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.