Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC30573.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
EIC30571.1
Hypothetical protein.
      
0.773
EIC30572.1
Hypothetical protein.
       0.773
EIC30574.1
Hypothetical protein.
       0.773
EIC30575.1
Putative transcriptional regulator; PFAM: Helix-turn-helix.
       0.773
EIC30576.1
Hypothetical protein.
       0.762
EIC30570.1
Hypothetical protein.
       0.757
EIC30569.1
Hypothetical protein.
       0.423
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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