Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EIC30723.1PFAM: Exonuclease; Exonuclease C-terminal. (493 aa)    
Predicted Functional Partners:
EIC29649.1
PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ.
    
 
 0.805
EIC30724.1
Putative transcriptional regulator, contains C-terminal CBS domains; PFAM: CBS domain.
       0.770
EIC28483.1
PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb).
    
   0.721
EIC29933.1
Single stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
    
   0.721
EIC30721.1
Hypothetical protein.
       0.675
EIC30722.1
Putative membrane protein involved in D-alanine export; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.
       0.675
EIC30725.1
PFAM: Protein of unknown function (DUF539).
       0.589
EIC30577.1
Single-stranded DNA-binding protein; PFAM: Single-strand binding protein family.
    
   0.531
EIC31054.1
Single-stranded DNA-binding protein; PFAM: Single-strand binding protein family.
    
   0.531
recB
Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]
  
   
 0.526
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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