STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC30785.1PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family. (496 aa)    
Predicted Functional Partners:
EIC30786.1
PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family.
 0.999
EIC30784.1
Hemolysin-coregulated protein (uncharacterized); PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family.
 
 0.998
EIC30763.1
PFAM: OmpA family; Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family.
 
  
 0.991
EIC30779.1
Type VI secretion ATPase, ClpV1 family; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family; Belongs to the ClpA/ClpB family.
 0.988
EIC30759.1
PFAM: Protein of unknown function (DUF877); Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; type VI secretion protein, VC_A0107 family.
 
0.987
EIC30787.1
PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, ImpA family.
 
 
 0.982
EIC30781.1
PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family.
 
  
 0.978
EIC30783.1
Protein of avirulence locus involved in temperature-dependent protein secretion; PFAM: ImpE protein.
 
    0.970
EIC30780.1
PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family.
 
 
 0.968
EIC30782.1
PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein.
 
  
 0.964
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.