STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC30810.1Multidrug resistance efflux pump; PFAM: HlyD family secretion protein. (328 aa)    
Predicted Functional Partners:
EIC30808.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
  
 0.957
EIC30809.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
   0.920
EIC30811.1
PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
  0.911
macB
ABC-type antimicrobial peptide transport system, ATPase component; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.738
EIC30282.1
Type I secretion system ATPase, LssB family; PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: type I secretion system ATPase, LssB family.
  
 0.726
EIC29860.1
PFAM: Outer membrane efflux protein.
  
  0.646
EIC29265.1
PFAM: Outer membrane efflux protein.
  
  0.634
EIC31029.1
PFAM: Outer membrane efflux protein.
  
  0.633
EIC31528.1
PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
  0.633
EIC31421.1
PFAM: Outer membrane efflux protein.
  
  0.584
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.