Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC30903.1Putative endonuclease containing a URI domain; PFAM: GIY-YIG catalytic domain; manually curated. (110 aa)    
Predicted Functional Partners:
EIC30901.1
Uncharacterized small protein; PFAM: Uncharacterised protein family (UPF0175); Phd_YefM.
       0.773
EIC30902.1
Putative nucleic acid-binding protein; Contains PIN domain; PFAM: Domain of unknown function (DUF3368).
       0.773
EIC30904.1
Hypothetical protein.
       0.773
EIC30899.1
PFAM: Phd_YefM.
       0.587
EIC30900.1
Hypothetical protein; PFAM: Plasmid maintenance system killer protein.
       0.587
EIC30905.1
Adenine-specific DNA methylase containing a Zn-ribbon; PFAM: Protein of unknown function (DUF1156).
       0.586
EIC30906.1
Superfamily II helicase; PFAM: DEAD/DEAH box helicase.
       0.511
EIC30897.1
Putative ATPase (AAA+ superfamily); PFAM: Protein of unknown function (DUF499).
       0.451
EIC30898.1
Hypothetical protein.
       0.451
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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