Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EIC31029.1PFAM: Outer membrane efflux protein. (433 aa)    
Predicted Functional Partners:
EIC31030.1
TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.960
EIC31031.1
PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
  0.908
EIC31032.1
PFAM: Protein of unknown function (DUF3240).
       0.806
EIC28864.1
Hypothetical protein.
  
  0.787
EIC30810.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
  
  0.772
EIC30819.1
PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance.
  
 
   0.760
EIC29660.1
PFAM: GTPase of unknown function.
  
     0.750
EIC30551.1
PFAM: Copper resistance protein D.
  
     0.745
EIC29754.1
PFAM: Predicted periplasmic lipoprotein (DUF2279).
  
     0.726
EIC29661.1
PFAM: GTPase of unknown function.
  
     0.725
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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