STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC31041.1PFAM: Transposase IS200 like. (150 aa)    
Predicted Functional Partners:
EIC31042.1
Hypothetical protein.
       0.773
EIC31043.1
Putative nucleic acid-binding protein; Contains PIN domain; PFAM: PIN domain.
       0.752
EIC31044.1
Hypothetical protein.
       0.752
EIC28934.1
PFAM: Transposase IS200 like.
  
     0.687
EIC29714.1
PFAM: Transposase IS200 like.
  
     0.649
EIC29426.1
PFAM: Transposase IS200 like.
  
     0.626
EIC31036.1
PFAM: Nucleotidyltransferase domain; manually curated.
 
     0.623
EIC30796.1
PFAM: Transposase IS200 like.
  
     0.605
EIC29495.1
PFAM: Transposase IS200 like.
  
     0.589
EIC28402.1
Hypothetical protein.
  
     0.569
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.