Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIC31234.1Putative periplasmic protein; PFAM: Bacterial protein of unknown function (DUF920). (221 aa)    
Predicted Functional Partners:
EIC31233.1
EAL domain-containing protein; PFAM: EAL domain; HAMP domain; GGDEF domain.
 
 
 0.975
EIC30282.1
Type I secretion system ATPase, LssB family; PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: type I secretion system ATPase, LssB family.
 
   
 0.859
EIC30283.1
PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family.
 
   
 0.812
EIC30281.1
Hypothetical protein.
 
     0.780
EIC31235.1
Putative metal-dependent hydrolase; PFAM: Protein of unknown function DUF45.
       0.773
EIC31464.1
VCBS repeat-containing protein; TIGRFAM: VCBS repeat.
 
   
 0.666
EIC31463.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass).
 
     0.634
EIC28702.1
PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family.
 
   
 0.597
EIC28348.1
PAS domain S-box; PFAM: Bacterial regulatory proteins, luxR family; PAS fold; TIGRFAM: PAS domain S-box.
   
 
 0.421
EIC30272.1
EAL domain-containing protein; PFAM: EAL domain; GGDEF domain.
   
 
 0.421
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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