Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EIC31380.1GTPase subunit of restriction endonuclease; PFAM: AAA domain (dynein-related subfamily). (732 aa)    
Predicted Functional Partners:
EIC31381.1
PFAM: McrBC 5-methylcytosine restriction system component.
 
 
 0.996
EIC28704.1
Hypothetical protein.
  
     0.710
EIC30171.1
Rhs family protein; PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies).
  
     0.697
EIC29050.1
PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
  
     0.668
EIC28015.1
Ca2+-binding protein, RTX toxin; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
  
     0.648
EIC29606.1
PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); manually curated.
  
     0.639
EIC28272.1
PFAM: REJ domain.
  
     0.582
EIC29282.1
PFAM: Patatin-like phospholipase.
  
     0.564
EIC29822.1
HEAT repeat-containing protein; PFAM: Adaptin N terminal region.
 
     0.559
EIC28552.1
PFAM: Type I restriction modification DNA specificity domain.
 
  
 0.548
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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