STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC31402.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (241 aa)    
Predicted Functional Partners:
EIC28789.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
 
 
  0.937
EIC28788.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
 
 
  0.930
EIC31403.1
ABC-type transport system involved in cytochrome c biogenesis, permease component; PFAM: ABC-2 type transporter.
 
 
  0.907
EIC30239.1
Hypothetical protein.
  
 0.898
EIC31400.1
Streptogramin lyase.
 
     0.832
EIC29918.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
  
 
  0.822
EIC28102.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
  
 
0.819
EIC31399.1
PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain.
 
     0.802
msbA
Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 
 
0.801
EIC31401.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
 
     0.801
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.