Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EIC31436.1TIGRFAM: DNA binding domain, excisionase family. (264 aa)    
Predicted Functional Partners:
EIC28855.1
Methylase involved in ubiquinone/menaquinone biosynthesis; PFAM: Methyltransferase domain.
  
     0.717
EIC28961.1
Outer membrane cobalamin receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.670
EIC28911.1
Hypothetical protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat.
  
     0.616
EIC29544.1
PFAM: GGDEF domain; Response regulator receiver domain; HDOD domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
     0.603
EIC28910.1
PFAM: Multicopper oxidase.
  
     0.579
EIC29545.1
PAS domain S-box; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box.
 
   
 0.523
EIC31136.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
  
     0.509
EIC30488.1
PAS domain S-box; PFAM: Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box.
  
     0.481
EIC30443.1
Hypothetical protein.
  
     0.444
EIC30034.1
PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B.
  
 
   0.437
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
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