STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIC31572.1Cupin domain-containing protein; PFAM: Cupin domain. (110 aa)    
Predicted Functional Partners:
EIC29784.1
Putative metal-dependent hydrolase; PFAM: Putative cyclase.
  
    0.600
EIC31571.1
PFAM: Archease protein family (DUF101/UPF0211).
       0.546
rtcB
PFAM: Uncharacterized protein family UPF0027; Belongs to the RtcB family.
       0.543
EIC31569.1
PFAM: Protein of Unknown function (DUF2784).
       0.532
EIC31573.1
Hypothetical protein.
       0.466
EIC30853.1
MEKHLA domain-containing protein; PFAM: MEKHLA domain.
  
     0.454
Your Current Organism:
Methylomicrobium album
NCBI taxonomy Id: 686340
Other names: M. album BG8, Methylomicrobium album BG8, Methylomicrobium album str. BG8, Methylomicrobium album strain BG8
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.