STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000222125_02552Unannotated protein. (447 aa)    
Predicted Functional Partners:
GCA_000222125_02553
Unannotated protein.
 
 0.977
GCA_000222125_02554
Unannotated protein.
 
 0.899
GCA_000222125_04594
Unannotated protein.
 
 0.895
GCA_000222125_00020
Unannotated protein.
 
 0.841
GCA_000222125_04595
Unannotated protein.
 
 0.802
GCA_000222125_00021
Unannotated protein.
 
 
 0.801
GCA_000222125_04364
Unannotated protein.
 
 0.801
GCA_000222125_00424
Unannotated protein.
 
 0.799
GCA_000222125_04366
Unannotated protein.
 
 0.795
GCA_000222125_03495
Unannotated protein.
 
 
 0.791
Your Current Organism:
Pseudomonas sp. S9
NCBI taxonomy Id: 686578
Other names: P. sp. S9
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.