STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDL74313.1TRAP transporter, DctM subunit. (437 aa)    
Predicted Functional Partners:
SDL74337.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.985
SDL20169.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.937
SDL74356.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  
 0.931
SDL43364.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.889
SDL20207.1
Tripartite ATP-independent transporter solute receptor, DctP family.
  
 0.845
SDL10622.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.774
SDL10639.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
  
 0.742
SDL74296.1
Hypothetical protein.
       0.576
SDL36555.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
 0.540
SDL74135.1
Uncharacterized conserved protein YlxW, UPF0749 family.
       0.434
Your Current Organism:
Tessaracoccus oleiagri
NCBI taxonomy Id: 686624
Other names: CGMCC 1.9159, DSM 22955, T. oleiagri, Tessaracoccus oleiagri Cai et al. 2011, Tessaracoccus sp. SL014B-20A1, Tessaracoccus sp. SL014B-76A1, Tessaracoccus sp. SL014B-79A, strain SL014B-20A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.