STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDD68828.1Uncharacterized conserved protein. (653 aa)    
Predicted Functional Partners:
SDD68806.1
DNA-binding transcriptional regulator, XRE-family HTH domain.
       0.773
SDD68781.1
Hypothetical protein.
       0.555
Your Current Organism:
Algoriphagus faecimaris
NCBI taxonomy Id: 686796
Other names: A. faecimaris, Algoriphagus faecimaris Li et al. 2011, Algoriphagus sp. LYX05, DSM 23095, JCM 16561, LMG 25474, LMG:25474, strain LYX05
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.