A0A0C3CCG4 protein (Hebeloma cylindrosporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0C3CCG4

Uncharacterized protein. (1150 aa)

Predicted Functional Partners:

A0A0C3BRF2

0.821

A0A0C3C747

0.652

A0A0C2YV45

0.538

A0A0C3C6L6

0.470

A0A0C3CX00

0.465

A0A0C3CG57

0.455

A0A0C3CN81

0.432

GET3

0.410

A0A0C2YFQ5

0.407

Your Current Organism:

Hebeloma cylindrosporum

NCBI taxonomy Id: 686832
Other names: H. cylindrosporum h7, Hebeloma cylindrosporum h7

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0C2YFQ5	A0A0C3C6L6	A0A0C2YFQ5	A0A0C3C6L6	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A0C2YFQ5	A0A0C3CCG4	A0A0C2YFQ5	A0A0C3CCG4	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A0C2YFQ5	A0A0C3CG57	A0A0C2YFQ5	A0A0C3CG57	Uncharacterized protein.	F-box domain-containing protein.	0.457
A0A0C2YV45	A0A0C3CCG4	A0A0C2YV45	A0A0C3CCG4	Fungal_trans domain-containing protein.	Uncharacterized protein.	0.538
A0A0C3BRF2	A0A0C3C747	A0A0C3BRF2	A0A0C3C747	Uncharacterized protein.	Uncharacterized protein.	0.916
A0A0C3BRF2	A0A0C3CCG4	A0A0C3BRF2	A0A0C3CCG4	Uncharacterized protein.	Uncharacterized protein.	0.821
A0A0C3BRF2	GET3	A0A0C3BRF2	A0A0C2Z5J3	Uncharacterized protein.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.992
A0A0C3C6L6	A0A0C2YFQ5	A0A0C3C6L6	A0A0C2YFQ5	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A0C3C6L6	A0A0C3CCG4	A0A0C3C6L6	A0A0C3CCG4	Uncharacterized protein.	Uncharacterized protein.	0.470
A0A0C3C6L6	A0A0C3CG57	A0A0C3C6L6	A0A0C3CG57	Uncharacterized protein.	F-box domain-containing protein.	0.438
A0A0C3C747	A0A0C3BRF2	A0A0C3C747	A0A0C3BRF2	Uncharacterized protein.	Uncharacterized protein.	0.916
A0A0C3C747	A0A0C3CCG4	A0A0C3C747	A0A0C3CCG4	Uncharacterized protein.	Uncharacterized protein.	0.652
A0A0C3C747	GET3	A0A0C3C747	A0A0C2Z5J3	Uncharacterized protein.	ATPase GET3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]	0.963
A0A0C3CCG4	A0A0C2YFQ5	A0A0C3CCG4	A0A0C2YFQ5	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A0C3CCG4	A0A0C2YV45	A0A0C3CCG4	A0A0C2YV45	Uncharacterized protein.	Fungal_trans domain-containing protein.	0.538
A0A0C3CCG4	A0A0C3BRF2	A0A0C3CCG4	A0A0C3BRF2	Uncharacterized protein.	Uncharacterized protein.	0.821
A0A0C3CCG4	A0A0C3C6L6	A0A0C3CCG4	A0A0C3C6L6	Uncharacterized protein.	Uncharacterized protein.	0.470
A0A0C3CCG4	A0A0C3C747	A0A0C3CCG4	A0A0C3C747	Uncharacterized protein.	Uncharacterized protein.	0.652
A0A0C3CCG4	A0A0C3CG57	A0A0C3CCG4	A0A0C3CG57	Uncharacterized protein.	F-box domain-containing protein.	0.455
A0A0C3CCG4	A0A0C3CN81	A0A0C3CCG4	A0A0C3CN81	Uncharacterized protein.	Uncharacterized protein.	0.432