STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403875_03136Unannotated protein. (179 aa)    
Predicted Functional Partners:
GCA_001403875_00670
Unannotated protein.
  
 0.884
GCA_001403875_04921
Unannotated protein.
   
 0.875
GCA_001403875_00280
Unannotated protein.
   
 0.860
GCA_001403875_01175
Unannotated protein.
   
 0.856
GCA_001403875_00162
Unannotated protein.
   
 0.852
GCA_001403875_01415
Unannotated protein.
   
 0.843
GCA_001403875_03137
Unannotated protein.
       0.836
GCA_001403875_00660
Unannotated protein.
    
 0.821
GCA_001403875_02349
Unannotated protein.
    
 0.806
GCA_001403875_03146
Unannotated protein.
  
 0.805
Your Current Organism:
Paenibacillus ihumii
NCBI taxonomy Id: 687436
Other names: DSM 100664, P. ihumii, Paenibacillus ihumii Togo et al. 2017, Paenibacillus sp. AT5, strain AT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.