STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001403875_03722Unannotated protein. (301 aa)    
Predicted Functional Partners:
GCA_001403875_02941
Unannotated protein.
  
  
  0.773
GCA_001403875_02943
Unannotated protein.
  
  
  0.745
GCA_001403875_01895
Unannotated protein.
    
  0.732
GCA_001403875_02942
Unannotated protein.
 
     0.722
GCA_001403875_02177
Unannotated protein.
  
     0.623
GCA_001403875_03723
Unannotated protein.
 
    
0.601
GCA_001403875_00692
Unannotated protein.
  
    0.586
GCA_001403875_01195
Unannotated protein.
  
     0.584
GCA_001403875_01826
Unannotated protein.
  
     0.576
GCA_001403875_01190
Unannotated protein.
  
     0.546
Your Current Organism:
Paenibacillus ihumii
NCBI taxonomy Id: 687436
Other names: DSM 100664, P. ihumii, Paenibacillus ihumii Togo et al. 2017, Paenibacillus sp. AT5, strain AT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.