A0A5C3LGB1 protein (Crucibulum laeve) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3LGB1

AAA domain-containing protein. (1389 aa)

Predicted Functional Partners:

A0A5C3M0Y3

0.982

A0A5C3LV70

0.970

A0A5C3MRV7

0.957

A0A5C3M4L4

0.912

A0A5C3ME43

0.774

A0A5C3MN83

0.740

A0A5C3LYJ9

0.712

A0A5C3LZU9

0.700

A0A5C3M6C4

0.700

A0A5C3M3I7

0.677

Your Current Organism:

Crucibulum laeve

NCBI taxonomy Id: 68775
Other names: C. laeve

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3LGB1	A0A5C3LV70	AAA domain-containing protein.	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	0.970
A0A5C3LGB1	A0A5C3LYJ9	AAA domain-containing protein.	Lipid binding protein.	0.712
A0A5C3LGB1	A0A5C3LZU9	AAA domain-containing protein.	Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.	0.700
A0A5C3LGB1	A0A5C3M0Y3	AAA domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.982
A0A5C3LGB1	A0A5C3M3I7	AAA domain-containing protein.	PX domain-containing protein.	0.677
A0A5C3LGB1	A0A5C3M4L4	AAA domain-containing protein.	Vps5 C terminal like-domain-containing protein.	0.912
A0A5C3LGB1	A0A5C3M6C4	AAA domain-containing protein.	PX domain-containing protein.	0.700
A0A5C3LGB1	A0A5C3ME43	AAA domain-containing protein.	Vps5 C terminal like-domain-containing protein.	0.774
A0A5C3LGB1	A0A5C3MN83	AAA domain-containing protein.	Rab-GTPase-TBC domain-containing protein.	0.740
A0A5C3LGB1	A0A5C3MRV7	AAA domain-containing protein.	Phox homologous domain-containing protein.	0.957
A0A5C3LV70	A0A5C3LGB1	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	AAA domain-containing protein.	0.970
A0A5C3LV70	A0A5C3LYJ9	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Lipid binding protein.	0.767
A0A5C3LV70	A0A5C3LZU9	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.	0.537
A0A5C3LV70	A0A5C3M0Y3	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.999
A0A5C3LV70	A0A5C3M3I7	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	PX domain-containing protein.	0.724
A0A5C3LV70	A0A5C3M4L4	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Vps5 C terminal like-domain-containing protein.	0.976
A0A5C3LV70	A0A5C3M6C4	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	PX domain-containing protein.	0.786
A0A5C3LV70	A0A5C3ME43	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Vps5 C terminal like-domain-containing protein.	0.974
A0A5C3LV70	A0A5C3MN83	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Rab-GTPase-TBC domain-containing protein.	0.963
A0A5C3LV70	A0A5C3MRV7	Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.	Phox homologous domain-containing protein.	0.892