STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3LGR8Intradiol ring-cleavage dioxygenase. (195 aa)    
Predicted Functional Partners:
A0A5C3MCC4
TAP42-like protein.
    
 0.706
A0A5C3MCZ5
Electron transfer protein 1.
    
 0.615
A0A5C3LK64
Serine/threonine-protein phosphatase.
   
 
 0.586
A0A5C3ME74
Glycoside hydrolase family 13 protein.
   
 
  0.565
A0A5C3LVV2
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
     
 0.555
A0A5C3MAX6
Shikimate_dh_N domain-containing protein.
     
 0.555
A0A5C3M3Y4
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.554
A0A5C3LGK7
ATP synthase subunit gamma.
   
   0.545
A0A5C3M506
Metallo-dependent phosphatase-like protein.
    
 
 0.544
A0A5C3M538
Uncharacterized protein.
    
 
 0.544
Your Current Organism:
Crucibulum laeve
NCBI taxonomy Id: 68775
Other names: C. laeve
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