STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3LJR4Ribosome biogenesis ATPase RIX7. (766 aa)    
Predicted Functional Partners:
A0A5C3LV12
rRNA-processing arch domain-containing protein.
   
 
 0.955
A0A5C3LVV0
Uncharacterized protein.
   
  
 0.913
A0A5C3MFI7
Brix domain-containing protein.
   
 
 0.894
A0A5C3M3C6
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.884
A0A5C3LRS7
Uncharacterized protein.
   
 0.880
A0A5C3MD99
Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family.
   
  
 0.878
A0A5C3LLU7
MI domain-containing protein.
   
    0.877
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.872
A0A5C3M9D3
NPL4 family-domain-containing protein.
    
 0.870
A0A5C3M4T0
Ubiquitin-related domain-containing protein.
    
 0.864
Your Current Organism:
Crucibulum laeve
NCBI taxonomy Id: 68775
Other names: C. laeve
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