A0A5C3LK37 protein (Crucibulum laeve) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3LK37

Peptidase family C54-domain-containing protein. (1106 aa)

Predicted Functional Partners:

A0A5C3ME53

0.998

A0A5C3LIF0

0.982

A0A5C3M1F8

0.878

A0A5C3M449

0.878

A0A5C3M9Z3

0.878

A0A5C3LZV2

0.780

A0A5C3MG10

0.733

A0A5C3MHI6

0.733

A0A5C3LX33

0.732

A0A5C3MI19

0.654

Your Current Organism:

Crucibulum laeve

NCBI taxonomy Id: 68775
Other names: C. laeve

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3LIF0	A0A5C3LK37	Other/ULK/ULK protein kinase.	Peptidase family C54-domain-containing protein.	0.982
A0A5C3LIF0	A0A5C3LX33	Other/ULK/ULK protein kinase.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]	0.723
A0A5C3LIF0	A0A5C3LZV2	Other/ULK/ULK protein kinase.	WD40 repeat-like protein.	0.975
A0A5C3LIF0	A0A5C3M1F8	Other/ULK/ULK protein kinase.	Alpha/Beta hydrolase protein.	0.869
A0A5C3LIF0	A0A5C3M449	Other/ULK/ULK protein kinase.	Alpha/beta-hydrolase.	0.869
A0A5C3LIF0	A0A5C3M9Z3	Other/ULK/ULK protein kinase.	Alpha/beta-hydrolase.	0.869
A0A5C3LIF0	A0A5C3ME53	Other/ULK/ULK protein kinase.	Autophagy-related protein.	0.997
A0A5C3LIF0	A0A5C3MG10	Other/ULK/ULK protein kinase.	Uncharacterized protein.	0.915
A0A5C3LIF0	A0A5C3MHI6	Other/ULK/ULK protein kinase.	Autophagy-related protein 3.	0.915
A0A5C3LIF0	A0A5C3MI19	Other/ULK/ULK protein kinase.	Beclin 1 protein.	0.996
A0A5C3LK37	A0A5C3LIF0	Peptidase family C54-domain-containing protein.	Other/ULK/ULK protein kinase.	0.982
A0A5C3LK37	A0A5C3LX33	Peptidase family C54-domain-containing protein.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]	0.732
A0A5C3LK37	A0A5C3LZV2	Peptidase family C54-domain-containing protein.	WD40 repeat-like protein.	0.780
A0A5C3LK37	A0A5C3M1F8	Peptidase family C54-domain-containing protein.	Alpha/Beta hydrolase protein.	0.878
A0A5C3LK37	A0A5C3M449	Peptidase family C54-domain-containing protein.	Alpha/beta-hydrolase.	0.878
A0A5C3LK37	A0A5C3M9Z3	Peptidase family C54-domain-containing protein.	Alpha/beta-hydrolase.	0.878
A0A5C3LK37	A0A5C3ME53	Peptidase family C54-domain-containing protein.	Autophagy-related protein.	0.998
A0A5C3LK37	A0A5C3MG10	Peptidase family C54-domain-containing protein.	Uncharacterized protein.	0.733
A0A5C3LK37	A0A5C3MHI6	Peptidase family C54-domain-containing protein.	Autophagy-related protein 3.	0.733
A0A5C3LK37	A0A5C3MI19	Peptidase family C54-domain-containing protein.	Beclin 1 protein.	0.654