STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3LN53CCHC-type domain-containing protein. (188 aa)    
Predicted Functional Partners:
A0A5C3M9J4
Uncharacterized protein.
    
 0.923
A0A5C3MC83
Uncharacterized protein.
    
 0.747
A0A5C3M9F1
WD40-repeat-containing domain protein.
    
 0.719
A0A5C3MF88
Uncharacterized protein.
    
  0.689
A0A5C3MMS7
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.688
A0A5C3M927
Uncharacterized protein.
    
  0.663
A0A5C3MCY9
dUTP pyrophosphatase.
    
  0.663
A0A5C3MFS0
Uncharacterized protein.
    
  0.663
A0A5C3MHV8
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.645
A0A5C3LSD3
Velvet factor-domain-containing protein.
    
  0.641
Your Current Organism:
Crucibulum laeve
NCBI taxonomy Id: 68775
Other names: C. laeve
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.