A0A5C3LXW4 protein (Crucibulum laeve) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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Score

A0A5C3LXW4

Fungal-specific transcription factor domain-containing protein. (796 aa)

Predicted Functional Partners:

A0A5C3MC72

0.806

A0A5C3LVW0

0.731

A0A5C3LNY6

0.724

A0A5C3LUN4

0.716

A0A5C3LSJ5

0.712

A0A5C3MDB1

0.709

A0A5C3MBG1

0.706

A0A5C3MDV3

0.705

A0A5C3MG35

0.704

A0A5C3M7G1

0.703

Your Current Organism:

Crucibulum laeve

NCBI taxonomy Id: 68775
Other names: C. laeve

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3LNY6	A0A5C3LXW4	Nitrate reductase.	Fungal-specific transcription factor domain-containing protein.	0.724
A0A5C3LSJ5	A0A5C3LXW4	Uncharacterized protein.	Fungal-specific transcription factor domain-containing protein.	0.712
A0A5C3LUN4	A0A5C3LXW4	Uncharacterized protein.	Fungal-specific transcription factor domain-containing protein.	0.716
A0A5C3LUN4	A0A5C3MBG1	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.485
A0A5C3LVW0	A0A5C3LXW4	Uncharacterized protein.	Fungal-specific transcription factor domain-containing protein.	0.731
A0A5C3LVW0	A0A5C3MBG1	Uncharacterized protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.857
A0A5C3LXW4	A0A5C3LNY6	Fungal-specific transcription factor domain-containing protein.	Nitrate reductase.	0.724
A0A5C3LXW4	A0A5C3LSJ5	Fungal-specific transcription factor domain-containing protein.	Uncharacterized protein.	0.712
A0A5C3LXW4	A0A5C3LUN4	Fungal-specific transcription factor domain-containing protein.	Uncharacterized protein.	0.716
A0A5C3LXW4	A0A5C3LVW0	Fungal-specific transcription factor domain-containing protein.	Uncharacterized protein.	0.731
A0A5C3LXW4	A0A5C3M7G1	Fungal-specific transcription factor domain-containing protein.	Ribosomal protein S16 domain-containing protein.	0.703
A0A5C3LXW4	A0A5C3MBG1	Fungal-specific transcription factor domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.706
A0A5C3LXW4	A0A5C3MC72	Fungal-specific transcription factor domain-containing protein.	Uncharacterized protein.	0.806
A0A5C3LXW4	A0A5C3MDB1	Fungal-specific transcription factor domain-containing protein.	Uncharacterized protein.	0.709
A0A5C3LXW4	A0A5C3MDV3	Fungal-specific transcription factor domain-containing protein.	Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.	0.705
A0A5C3LXW4	A0A5C3MG35	Fungal-specific transcription factor domain-containing protein.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.704
A0A5C3M7G1	A0A5C3LXW4	Ribosomal protein S16 domain-containing protein.	Fungal-specific transcription factor domain-containing protein.	0.703
A0A5C3M7G1	A0A5C3MDB1	Ribosomal protein S16 domain-containing protein.	Uncharacterized protein.	0.999
A0A5C3M7G1	A0A5C3MDV3	Ribosomal protein S16 domain-containing protein.	Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.	0.999
A0A5C3M7G1	A0A5C3MG35	Ribosomal protein S16 domain-containing protein.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999

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Network Stats

number of nodes:

11

number of edges:

53

average node degree:

9.64

avg. local clustering coefficient:

0.968

expected number of edges:

34

PPI enrichment p-value:

0.00124

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006412

Translation

10 of 102

1.5

2.9

6.89e-12

GO:0044271

Cellular nitrogen compound biosynthetic process

11 of 303

1.07

1.46

3.07e-10

GO:1901566

Organonitrogen compound biosynthetic process

11 of 318

1.05

1.4

4.53e-10

GO:0043933

Protein-containing complex organization

2 of 14

1.67

0.69

0.0432

GO:0044238

Primary metabolic process

11 of 1056

0.53

0.46

8.50e-05

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003735

Structural constituent of ribosome

9 of 51

1.76

3.92

1.77e-12

GO:0019843

rRNA binding

6 of 40

1.69

2.54

2.78e-07

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0005840

Ribosome

9 of 56

1.72

3.85

6.92e-13

GO:0044391

Ribosomal subunit

4 of 13

2.0

2.68

2.01e-06

GO:0015935

Small ribosomal subunit

3 of 6

2.21

2.36

2.40e-05

GO:0005622

Intracellular anatomical structure

11 of 1155

0.49

0.43

5.02e-05

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:146

Ribosome, and Translational elongation

9 of 68

1.63

3.41

3.60e-12

CL:134

Ribosome, and Ribonucleoside triphosphate biosynthetic process

11 of 104

1.54

3.32

1.80e-14

CL:153

Ribosome

7 of 42

1.73

3.24

1.09e-09

CL:149

Ribosome, and RNA polymerase

8 of 59

1.64

3.2

1.00e-10

CL:157

Structural constituent of ribosome

5 of 29

1.75

2.44

1.30e-06

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map03010

Ribosome

9 of 55

1.73

3.88

6.52e-13

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0005840

Ribosome

6 of 37

1.72

2.6

2.63e-07

GOCC:0044391

Ribosomal subunit

4 of 16

1.91

2.24

1.62e-05

GOCC:0015934

Large ribosomal subunit

2 of 7

1.97

1.05

0.0097

GOCC:0043229

Intracellular organelle

9 of 325

0.95

1.02

3.20e-06

GOCC:0015935

Small ribosomal subunit

2 of 9

1.86

0.97

0.0132

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0689

Ribosomal protein

9 of 55

1.73

3.84

1.04e-12

KW-0699

rRNA-binding

6 of 38

1.71

2.75

6.62e-08

KW-0820

tRNA-binding

2 of 14

1.67

0.72

0.0374

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