A0A5C3M6M0 protein (Crucibulum laeve) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A5C3M6M0

Acyl-CoA dehydrogenase. (519 aa)

Predicted Functional Partners:

A0A5C3M4A1

0.945

A0A5C3MM22

0.918

A0A5C3M7P1

0.915

A0A5C3MKI7

0.915

A0A5C3M0L3

0.910

A0A5C3MFA7

0.897

A0A5C3M0T4

0.886

A0A5C3MGE6

0.865

A0A5C3MIL4

0.856

A0A5C3MCI0

0.837

Your Current Organism:

Crucibulum laeve

NCBI taxonomy Id: 68775
Other names: C. laeve

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A5C3M0L3	A0A5C3M0T4	ETF domain-containing protein.	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.659
A0A5C3M0L3	A0A5C3M6M0	ETF domain-containing protein.	Acyl-CoA dehydrogenase.	0.910
A0A5C3M0L3	A0A5C3M7P1	ETF domain-containing protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.474
A0A5C3M0L3	A0A5C3MCI0	ETF domain-containing protein.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.834
A0A5C3M0L3	A0A5C3MGE6	ETF domain-containing protein.	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.917
A0A5C3M0L3	A0A5C3MIL4	ETF domain-containing protein.	3-hydroxyacyl-CoA dehydrogenase.	0.749
A0A5C3M0L3	A0A5C3MKI7	ETF domain-containing protein.	DHS-like NAD/FAD-binding domain-containing protein.	0.999
A0A5C3M0T4	A0A5C3M0L3	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	ETF domain-containing protein.	0.659
A0A5C3M0T4	A0A5C3M6M0	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Acyl-CoA dehydrogenase.	0.886
A0A5C3M0T4	A0A5C3MCI0	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.	0.931
A0A5C3M0T4	A0A5C3MGE6	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.931
A0A5C3M0T4	A0A5C3MIL4	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	3-hydroxyacyl-CoA dehydrogenase.	0.884
A0A5C3M0T4	A0A5C3MKI7	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	DHS-like NAD/FAD-binding domain-containing protein.	0.783
A0A5C3M4A1	A0A5C3M6M0	Complex I intermediate-associated protein CIA30.	Acyl-CoA dehydrogenase.	0.945
A0A5C3M4A1	A0A5C3M7P1	Complex I intermediate-associated protein CIA30.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.987
A0A5C3M4A1	A0A5C3MFA7	Complex I intermediate-associated protein CIA30.	DUF498-domain-containing protein.	0.990
A0A5C3M4A1	A0A5C3MM22	Complex I intermediate-associated protein CIA30.	Nife hydrogenase-like protein; Belongs to the complex I 49 kDa subunit family.	0.773
A0A5C3M6M0	A0A5C3M0L3	Acyl-CoA dehydrogenase.	ETF domain-containing protein.	0.910
A0A5C3M6M0	A0A5C3M0T4	Acyl-CoA dehydrogenase.	Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.886
A0A5C3M6M0	A0A5C3M4A1	Acyl-CoA dehydrogenase.	Complex I intermediate-associated protein CIA30.	0.945