STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3M7H0TFIIS central domain-containing protein. (927 aa)    
Predicted Functional Partners:
A0A5C3M4M3
RNA polymerase.
    
  0.912
A0A5C3MTJ4
DNA-directed RNA polymerase.
    
  0.896
A0A5C3M371
Sister chromatid cohesion protein.
   
  
 0.894
A0A5C3LYH8
Uncharacterized protein.
    
 0.868
A0A5C3LZR2
RNA polymerase Rpb1, domain 7-domain-containing protein.
    
 0.868
A0A5C3M1S8
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.868
A0A5C3LHZ1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.860
A0A5C3M0N0
Transcription elongation factor.
    
 0.853
A0A5C3MDE7
Uncharacterized protein; Belongs to the peptidase C19 family.
   
 
  0.852
A0A5C3LXT9
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.840
Your Current Organism:
Crucibulum laeve
NCBI taxonomy Id: 68775
Other names: C. laeve
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