STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3M9I1PHD-type domain-containing protein. (1587 aa)    
Predicted Functional Partners:
A0A5C3LYV9
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.940
A0A5C3M9F1
WD40-repeat-containing domain protein.
    
 
 0.887
A0A5C3MDB7
Histone-fold-containing protein.
    
 
 0.815
A0A5C3M371
Sister chromatid cohesion protein.
   
    0.788
A0A5C3LXN8
Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
   0.768
A0A5C3M7H0
TFIIS central domain-containing protein.
   
    0.746
A0A5C3LWR7
Inorganic pyrophosphatase.
    
 
 0.702
A0A5C3MDE7
Uncharacterized protein; Belongs to the peptidase C19 family.
   
    0.683
A0A5C3LJV6
SNF2 family N-terminal domain-containing protein.
    
 
 0.615
A0A5C3LEA5
Uncharacterized protein.
   
   0.607
Your Current Organism:
Crucibulum laeve
NCBI taxonomy Id: 68775
Other names: C. laeve
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