STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MDV2Sec63 Brl domain-containing protein. (1599 aa)    
Predicted Functional Partners:
A0A5C3M869
NUC071 domain-containing protein.
   
 0.970
A0A5C3M086
PRP1 splicing factor, N-terminal-domain-containing protein.
   
 0.949
A0A5C3MF78
Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family.
    
 0.932
A0A5C3ME08
Sm domain-containing protein.
   
 0.928
A0A5C3MIN5
Small nuclear ribonucleoprotein Sm D3.
   
 0.927
A0A5C3M892
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.923
A0A5C3M6N1
Small nuclear ribonucleoprotein Sm D2.
   
 0.922
A0A5C3MFE9
Nop domain-containing protein.
    
 0.894
A0A5C3MKL9
PRP3-domain-containing protein.
    
 0.890
A0A5C3MID5
CPSF A subunit region-domain-containing protein.
   
 
 0.874
Your Current Organism:
Crucibulum laeve
NCBI taxonomy Id: 68775
Other names: C. laeve
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