STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MFJ4U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (469 aa)    
Predicted Functional Partners:
A0A5C3MHH8
Sas10 C-terminal domain-containing protein.
   
 0.997
A0A5C3LFS0
U3 small nucleolar RNA-associated protein 22.
   
 0.996
A0A5C3ME60
Uncharacterized protein.
   
  0.993
A0A5C3MEJ8
Utp21-domain-containing protein.
   
 0.993
A0A5C3M3V6
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.991
A0A5C3M8V0
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 
 0.985
A0A5C3MCD8
Uncharacterized protein.
   
 
 0.982
A0A5C3MEV5
Nucleolar protein 14.
   
 0.981
A0A5C3M785
Uncharacterized protein.
   
 0.976
A0A5C3MFE1
Anticodon-binding protein.
   
   0.974
Your Current Organism:
Crucibulum laeve
NCBI taxonomy Id: 68775
Other names: C. laeve
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