STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3MHM460Kd inner membrane protein-domain-containing protein. (338 aa)    
Predicted Functional Partners:
A0A5C3MKJ9
SecY subunit domain-containing protein.
   
 0.915
A0A5C3MEW3
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
 
      0.801
A0A5C3MC87
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
   
 0.796
A0A5C3LZ12
Uncharacterized protein.
   
 
 0.782
A0A5C3MCG7
Tryptophan synthase.
   
  
 0.782
A0A5C3M8R1
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.766
A0A5C3MG35
SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.
   
   0.753
A0A5C3MAG1
Ribosomal L27 protein-domain-containing protein.
  
   0.749
A0A5C3MEF5
60S ribosomal protein L7/L12.
   
 
 0.749
A0A5C3MBR7
Ribosomal proteins L2, C-terminal domain-containing protein.
   
 
 0.731
Your Current Organism:
Crucibulum laeve
NCBI taxonomy Id: 68775
Other names: C. laeve
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